Sea of Signals: Mass Spectrometry at the Frontier of Marine Drug Discovery and Pollution Detection
Dr Jarmo-Charles Kalinski
New Technologies & the -Omics / DAY 2 /
Olive Schreiner Hall

Abstract Authors

Jarmo-Charles Kalinski - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Idris Njanje - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Gabriella Solomons - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Tarryn Swart - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Dele Abdissa - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Wakisa Kipandula - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Alyson Bennett - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Michelle Isaacs - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Bruno Ruiz Brandão da Costa - Institute of Biosciences, University of São Paulo, Brazil

Daniel Petras - Collaborative Mass Spectrometry Innovation Center, University of California, United States of America

Rosemary Dorrington - Antimicrobial Drug Discovery (ADD) Hub, Department of Biochemistry, Microbiology and Bioinformatics, Rhodes University

Abstract Description

Over the past decade, High-Resolution Liquid Chromatography Tandem Mass Spectrometry (HR-LC-MS/MS) has emerged as the leading technique for resolving the structural complexity inherent in biological and environmental samples. Its unparalleled sensitivity and resolution make it especially effective for identifying both valuable bioactive compounds and harmful contaminants in marine matrices. In this presentation, we report on HR-LC-MS/MS metabolomics data derived from over 200 marine invertebrate and microbial extracts, combined with spectral library matching and in silico structure prediction to support antimicrobial drug discovery workflows. These efforts were further enhanced by integration with genomics and bioassay data leading to several new potential antimicrobial drug leads. We also demonstrate the utility of metabolomics in detecting organic contaminants within dissolved organic matter (DOM) in the marine environment, drawing on a large-scale interlaboratory study involving more than 1000 marine surface water extracts. This study underscores the profound influence of anthropogenic pollution on the marine chemical fingerprint. The talk concludes with a discussion of key challenges and pitfalls in LC-MS/MS analysis of marine samples, along with recommendations for advancing future directions in marine metabolomics.
Dr Jarmo-Charles Kalinski

ADD Hub